Boron Buckyballs: B80 cages in the lab
Posted by crescit_eundo 5 days ago
Comments
Comment by isoprophlex 3 days ago
Without a mass spectrum (telling you at the very least that they made a pure compound of 80 boron atoms) or even better a bulk synthesis route (extremely difficult, but giving you an amount of compound you can actually look at & investigate further) this should be filed under "tantalizing discovery but no definitive proof of existence".
I'd love to be proven wrong tho in my scepticism because this is one exciting molecule.
Comment by SyzygyRhythm 3 days ago
Comment by adrian_b 2 days ago
But both carbon and silicon are extremely cheap and abundant, many orders of magnitude more abundant than boron. Even phosphorus is several orders of magnitude more abundant than boron.
So in many cases there are carbon and/or silicon compounds (or sometimes phosphorus compounds) with properties not very different from some boron compounds. For instance in some applications where boron nitride or boron carbide would be desirable one of diamond, graphite, silicon nitride or silicon carbide may also be acceptable.
Therefore the boron compounds are typically used only when their specific benefits are so great that they overcome any cost difference over possible carbon-based or silicon-based or phosphorus-based substitutes.
In living beings (e.g. in plants), the role of boron is similar to that of phosphorus, both are used in their oxidized form, i.e. as phosphates or borates, which both have an affinity for binding to carbohydrates (like phosphate in nucleic acids) or sometimes to other alcohols (like in cellular membranes).
Comment by vi_sextus_vi 3 days ago
https://www.sigmaaldrich.com/SG/en/technical-documents/techn...
Remarkably pleasant to work with, unlike the class of compounds which include
https://en.wikipedia.org/wiki/Zip_fuel
And
Merlin's TEA-TEB
Easter egg:
At least one town https://en.wikipedia.org/wiki/Boron,_California
(Carbon has too many)
Comment by setopt 3 days ago
Maybe not for a chemist, but as a physicist it’s certainly useful. Liquid He cooling, Bose-Einstein condensation, superfluidity, p-wave triplet pairing in He-3, etc. while being basically chemically inert!
Comment by crescit_eundo 5 days ago
Comment by j16sdiz 3 days ago
Comment by IAmGraydon 3 days ago
Comment by cpard 3 days ago
Or maybe what works in math doesn’t work with chemistry?
Comment by vi_sextus_vi 3 days ago
It was predicted by decade old "theory" (with a single equation,and it seems that the original paper has no equations at all)
so OAI/DeepMind can quietly check if it's in the training or if they can extrapolate, yes
https://arxiv.org/abs/0803.2752
https://cen.acs.org/articles/85/i18/Boron-buckyball-predicte...
Comment by cpard 3 days ago
Comment by vi_sextus_vi 3 days ago
You'd expect a nice 240 given the symmetry, not a prime number
Or maybe a less baity reason is those hints of B_80^- have captured H+ "nuclei", turning into almolecular atoms!
Not oxyboronic at all
Comment by bartvk 3 days ago
Comment by vi_sextus_vi 2 days ago
Comment by phrotoma 3 days ago
Comment by gus_massa 2 days ago
It's not my area, but I'm sure B80 is one of the tricky ones. In general anything with Boron is hard. This in particular probably have some electrons that are not inside a "bond" between two atoms, but are distributed in the whole molecule. Something like benzene, that has a few electrons in a circular ring of 6 atoms, but in this case it's 3D and with 80 atoms. You need some special cases for the ring in benzene and similar molecules.
The main problem is that solving the molecules exactly needs exponential time in a classical computer. If H is the number of Hydrogen and X is the number of very light atoms, it's like (expt(2*(H+5X)))^3. Heavy atoms enter with a bigger multiplier. And that bound already has a lot approximations and simplifications. So for not trivial molecules and for big molecules that are important in biology with X~=100 or 1000 you must do some approximations.
DFT is one of them. Most of the time it works, specially if you choose the correct method inside the DFT label. I'm not surprised that there are exceptions. If confirmed, probably someone will create a new tweak inside of one of the method to fix the discrepancy.
Comment by vi_sextus_vi 2 days ago
Original paper, not a single equation:
https://web.archive.org/web/20240129185108/https://www.owlne...
The N^3 is further reduced by high symmetry. Because structure relaxations are usually convergent, the 2007 DFT and MD calculations can be run on a regular laptop today, maybe even without a GPU!
The discrepancy has been exaggerated by the experimentalist, TFA quotes the original theorist. This is not the first time, and probably not the last time, that c&en has oversold an experimental result.
Comment by phrotoma 2 days ago
Comment by sroussey 3 days ago
Comment by zahlman 3 days ago
Comment by bilsbie 2 days ago
Comment by amelius 2 days ago
Comment by wolfi1 3 days ago
Comment by evanb 2 days ago
Comment by gus_massa 2 days ago
Comment by wolfi1 2 days ago
Comment by gus_massa 1 day ago
It's very different in a heavy atom like Gold. The charge of the nuclei is x10 of the charge of the Carbon nuclei, so the inner electrons are x10 closer and the "speed" is x10 faster. [1] I don't remember the numbers, but some google search claims 2.7%c for Carbon and 58%c for Gold. You definitively can ignore the relativistic corrections at 2.7%c, there is a square somewhere in the formula and the corrections is like ~(1-(2.7/100)^2).
As the G...GP says, the problem are the weird parts of Quantum Mechanics that are ignored to get a fast method to get an approximation in DFT.
[1] There are some technical details to define "speed", but just squint your eyes and ignore the cries of physicist.
Comment by ziofill 3 days ago
Comment by vi_sextus_vi 3 days ago
It is only exciting for these theorists who predicted it. They can now hardly wait for a proper synthesis?
https://cen.acs.org/articles/85/i18/Boron-buckyball-predicte...
Comment by mkl 3 days ago
Comment by K0balt 3 days ago
Comment by analog31 3 days ago
Comment by RetroTechie 2 days ago
1. Figure out how to mass-produce the stuff 2. Come up with some totally unnecessary household & industrial applications, that involve the chemical's release into the environment 3. Find out it's hazardous. Or toxic. Or both. And -bonus points!- doesn't break down.
In that order.
Comment by zahlman 3 days ago
Comment by analog31 3 days ago