Pandas 3.0

Pandas created the modern Python data stack when there was not really any alternatives (except R and closed source). The original split-apply-combine paradigm was well thought out, simple, and effective, and the built in tools to read pretty much anything (including all of your awful csv files and excel tables) and deal with timestamps easily made it fit into tons of workflows. It pioneered a lot, and basically still serves as the foundation and common format for the industry.

I always recommend every member of my teams read Modern Pandas by Tom Augspurger when they start, as it covers all the modern concepts you need to get data work done fast and with high quality. The concepts carry over to polars.

And I have to thank the pandas team for being a very open and collaborative bunch. They’re humble and smart people, and every PR or issue I’ve interacted with them on has been great.

Polars is undeniably great software, it’s my standard tool today. But they did benefit from the failures and hard edges of pandas, pyspark, dask, the tidyverse, and xarray. It’s an advantage pandas didn’t have, and they still pay for.

I’m not trying to take away from polars at all. It’s damn fast — the benchmarks are hard to beat. I’ve been working on my own library and basically every optimization I can think of is already implemented in polars.

I do have a concern with their VC funding/commercialization with cloud. The core library is MIT licensed, but knowing they’ll always have this feauture wall when you want to scale is not ideal. I think it limits the future of the library a lot, and I think long term someone will fill that niche and the users will leave.

For better or worse, like Excel and like the simpler programming languages of old, Pandas lets you overwrite data in place.

Prepare some data

    df_pandas = pd.DataFrame({'a': [1, 2, 3, 4, 5], 'b': [10, 20, 30, 40, 50]})
    df_polars = pl.from_pandas(df_pandas)

    df_pandas.loc[1:3, 'b'] += 1

    df_pandas
       a   b
    0  1  10
    1  2  21
    2  3  31
    3  4  41
    4  5  50

    df_polars = df_polars.with_columns(
        pl.when(pl.int_range(0, pl.len()).is_between(1, 3))
        .then(pl.col("b") + 1)
        .otherwise(pl.col("b"))
        .alias("b")
    )

P.S. Polars has an optimization to overwite a single value

    df_polars[4, 'b'] += 5
    df_polars
    ┌─────┬─────┐
    │ a   ┆ b   │
    │ --- ┆ --- │
    │ i64 ┆ i64 │
    ╞═════╪═════╡
    │ 1   ┆ 10  │
    │ 2   ┆ 21  │
    │ 3   ┆ 31  │
    │ 4   ┆ 41  │
    │ 5   ┆ 55  │
    └─────┴─────┘

Polars is great, but it is better precisely because it learned from all the mistakes of Pandas. Don't besmirch the latter just because it now has to deal with the backwards compatibility of those mistakes, because when it first started, it was revolutionary.

I work with chemical datasets and this always involves converting SMILES string to Rdkit Molecule objects. Polars cannot do this as simply as calling .map on pandas.

Pandas is also much better to do EDA. So calling it worse in every instance is not true. If you are doing pure data manipulation then go ahead with polars

Where I certainly disagree is the "frame as a dict of time series" setting, and general time series analysis.

The feel is also different. Pandas is an interactive data analysis container, poorly suited for production use. Polars I feel is the other way round.

    import polars as pl
    from concurrent.futures import ProcessPoolExecutor

    pl.DataFrame({"a": [1,2,3], "b": [4,5,6]}).write_parquet("test.parquet")

    def read_parquet():
        x = pl.read_parquet("test.parquet")
        print(x.shape)

    with ProcessPoolExecutor() as executor:
        futures = [executor.submit(read_parquet) for _ in range(100)]
        r = [f.result() for f in futures]

The professor doesn't actually care which tool we use as long as we produce nice graphs, so this is as good a time as any to experiment.

Pandas is better for plotting and third party integration.

I used Pandas a lot with Jupyter notebooks. I don't have any experience with Polars. Is it also possible to work with Polars dataframes in Jupyter notebooks?

Unfortunately, there are a lot of third party libraries that work with Pandas that do not work with Polars, so the switch, even for new projects, should be done with that in mind.

OT, but I can’t imagine data science being a job category for too long. It’s got to be one of the first to go in AI age especially since the market is so saturated with mediocre talents.

It's funny to look back at the tricks that were needed to get gpt3 and 3.5 to write SQL (e.g. "you are a data analyst looking at a SQL database with table [tables]"). It's almost effortless now.

I have integrated Explorer https://github.com/elixir-explorer/explorer, which leverages it, into many Elixir apps, so happy to have this.

Is this everyone's experience?